Commit 4a248bc4 authored by Maciej Dobrzynski's avatar Maciej Dobrzynski Committed by GitHub

Update README.md

parent 3086a926
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This dataset contains around 234 time-series with 121 time points each. The set comes from a microfluidic time-lapse microscopy experiment. In this experiment, PC-12 cells were stimulated with 3 dosages of fibroblast growth factor 2 (FGF2): 2.5 ng/ml, 25 ng/ml, and 250 ng/ml. The stimulation was performed with 3' pulses of FGF2 at 20' intervals. The readout is the measurement of ERK activity using a FRET biosensor. This dataset contains around 234 time-series with 121 time points each. The set comes from a microfluidic time-lapse microscopy experiment. In this experiment, PC-12 cells were stimulated with 3 dosages of fibroblast growth factor 2 (FGF2): 2.5 ng/ml, 25 ng/ml, and 250 ng/ml. The stimulation was performed with 3' pulses of FGF2 at 20' intervals. The readout is the measurement of ERK activity using a FRET biosensor.
The set comes from a publication Blum *et al.* (2019) *Temporal perturbation of Erk dynamics reveals network architecture of FGF2-MAPK signaling* (**preprint**), available in [bioRxiv](https://www.biorxiv.org/content/10.1101/629287v1"bioRxiv")]. The set comes from a publication Blum *et al.* (2019) *Temporal perturbation of Erk dynamics reveals network architecture of FGF2-MAPK signaling* (**preprint**), available in [bioRxiv](https://www.biorxiv.org/content/10.1101/629287v1 "bioRxiv").
Files in this set: Files in this set:
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**`mp3-20_FGF_pulsey_y0-97.csv`** and **`mp3-20_FGF_pulse_y1100`** **`mp3-20_FGF_pulsey_y0-97.csv`** and **`mp3-20_FGF_pulse_y1100`**
Files with coordinates of segments to plot under time-series. Each row should contain x and y coordinates of the start and end of segments (4 columns: `tstart`, `tend`, `ystart`, `yend`), `group` column used for grouping of the main dataset in the app, a dummy `id` column. Files with coordinates of segments to plot under time-series. Each row should contain x and y coordinates of the start and end of segments (4 columns: `tstart`, `tend`, `ystart`, `yend`), `group` column used for grouping of the main dataset in the app, a dummy `id` column.
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