1. 22 Nov, 2018 1 commit
  2. 23 Oct, 2018 1 commit
  3. 08 Oct, 2018 1 commit
  4. 03 Aug, 2018 1 commit
  5. 14 Jun, 2018 1 commit
  6. 08 May, 2018 1 commit
  7. 30 Apr, 2018 2 commits
  8. 26 Apr, 2018 1 commit
  9. 12 Apr, 2018 1 commit
  10. 23 Mar, 2018 1 commit
  11. 18 Mar, 2018 1 commit
  12. 01 Feb, 2018 2 commits
  13. 29 Nov, 2017 1 commit
  14. 24 Nov, 2017 1 commit
  15. 22 Nov, 2017 2 commits
  16. 29 Oct, 2017 1 commit
    • dmattek's avatar
      Added: · c7c0bb8d
      dmattek authored
      - option to upload cell IDs for removal
      - option to calculate boxplots at particular time points with respect to a preceding point
      
      Changed:
      - hierarchical clustering made into a module
      c7c0bb8d
  17. 02 Sep, 2017 1 commit
    • dmattek's avatar
      Fixed: · b70dcf1a
      dmattek authored
      - trajPlot.R; cluster colours displayed properly when manually selecting clusters to display
      b70dcf1a
  18. 08 Aug, 2017 1 commit
    • dmattek's avatar
      Mod: · 01800774
      dmattek authored
      - colours from dendrogram cut match those in the bard plot and in trajectory plot
      01800774
  19. 28 Jul, 2017 3 commits
    • dmattek's avatar
      Mod: · 9d78c001
      dmattek authored
      - heatmap plotting function moved to auxfunc.R
      9d78c001
    • dmattek's avatar
      Reducing debug output · 0d6e33c7
      dmattek authored
      0d6e33c7
    • dmattek's avatar
      Mod: · 576e0c81
      dmattek authored
      - trajectory plotting and cluster distribution plot turned into modules
      576e0c81
  20. 27 Jul, 2017 1 commit
    • dmattek's avatar
      Added: · 49b9d1e6
      dmattek authored
      - optional stats in time series plotting
      - optional overlap of boxplot/violin/dotplot
      49b9d1e6
  21. 26 Jul, 2017 1 commit
    • dmattek's avatar
      Mod: · edae527e
      dmattek authored
      - recognize "*.os.x" and "*.os.y" as valid column names with X and Y positions
      - increase fixed plot with of clustered time series
      edae527e
  22. 25 Jul, 2017 1 commit
    • dmattek's avatar
      Added: · 79d2e2fe
      dmattek authored
      - detecting columns with X & Y positions and plotting them in interactive tcourse plot
      - option to skip Metadata_Site for contructing unique trackID if it already exists in the dataset
      - interactive box plots (works poorly)
      - static time course plot (no interaction)
      - skipping time points in tcourses
      79d2e2fe
  23. 20 Jul, 2017 1 commit
    • dmattek's avatar
      Added: · 3874ce02
      dmattek authored
      - box-/dot-/violin plots at discrete time points
      3874ce02
  24. 19 Jun, 2017 1 commit
  25. 30 May, 2017 1 commit
  26. 18 May, 2017 1 commit
    • dmattek's avatar
      Changed: · 22f5a492
      dmattek authored
      - modularized plot download
      
      Added:
      - download CSV with cellIDs and cluster assignment
      - download CSV after cleaning
      22f5a492
  27. 08 May, 2017 1 commit
  28. 12 Apr, 2017 1 commit
  29. 11 Apr, 2017 1 commit
  30. 17 Mar, 2017 1 commit
  31. 15 Mar, 2017 1 commit
  32. 14 Mar, 2017 1 commit
  33. 06 Mar, 2017 1 commit
  34. 04 Mar, 2017 1 commit
    • dmattek's avatar
      Bug fix: · e30e1438
      dmattek authored
      Error shows up in app log when plotting.
      
      "Warning: Error in <Anonymous>: cannot open file 'Rplots.pdf'"
      
      Fix based on: https://github.com/ropensci/plotly/issues/494
      
      Added in plotting f-n:
      if (names(dev.cur()) != "null device") dev.off()
      pdf(NULL)
      e30e1438
  35. 03 Mar, 2017 1 commit