Commits · 03f7ea273e05620223e9cde6686bc698f6073d4b · pertz-lab / shiny-timecourse-inspector

09 Apr, 2019 2 commits
- Merge branch 'feature-outlier-new' · 03f7ea27
  Maciej Dobrzynski authored Apr 09, 2019
```
Implements new outlier selection method
```
  03f7ea27
- Changed the type of quantile calculation to 3. · 8fc29800
  Maciej Dobrzynski authored Apr 09, 2019
  
  8fc29800
07 Apr, 2019 1 commit
- Create LICENSE · 7c389fb2
  Maciej Dobrzynski authored Apr 07, 2019
  
  7c389fb2
15 Feb, 2019 2 commits
- Fixed NA removal due to outliers · 17a85ab0
  Maciej Dobrzynski authored Feb 15, 2019
  
  17a85ab0
- Update of installation packages · bc10b4d1
  Maciej Dobrzynski authored Feb 15, 2019
  
  bc10b4d1
14 Feb, 2019 1 commit
- Fixed interpolation when measurements are integer; fixed by explicit conversion to numeric. · e3b5f13f
  dmattek authored Feb 14, 2019
  
  e3b5f13f
29 Jan, 2019 1 commit
- Added: multiple columns can be selected to add to track label and to create a unique track label ID · f2b565a3
  dmattek authored Jan 29, 2019
  
  f2b565a3
03 Dec, 2018 1 commit
- Added: outlier selection · e1b3f361
  dmattek authored Dec 03, 2018
  
  e1b3f361
26 Nov, 2018 2 commits
- Merge branch 'feature-manual-cluster-assignment' · c4fb7539
  dmattek authored Nov 26, 2018
```
Incorporated manual assignment of cluster colours in heatmaps
```
  c4fb7539
- Defined global variables for font sizes in plots · cfc6be30
  dmattek authored Nov 26, 2018
  
  cfc6be30
22 Nov, 2018 2 commits
- Remove dependency on TCA package · eebd8a44
  dmattek authored Nov 22, 2018
  
  eebd8a44
- Bug fixes · 89559932
  dmattek authored Nov 22, 2018
  
  89559932
23 Oct, 2018 2 commits
- Modified help tooltip text · bbcd3d20
  dmattek authored Oct 23, 2018
  
  bbcd3d20
- Added: option to upload and display stimulation pattern · 04739dba
  dmattek authored Oct 23, 2018
  
  04739dba
09 Oct, 2018 1 commit
- Added: field to manually assign cluster numbers · 8f41d9f4
  dmattek authored Oct 09, 2018
  
  8f41d9f4
08 Oct, 2018 1 commit
- added: rotated x-axis labels · 9d1f5677
  dmattek authored Oct 08, 2018
  
  9d1f5677
03 Aug, 2018 3 commits
- Changed: ggplot theme · 554bb9a8
  dmattek authored Aug 03, 2018
  
  554bb9a8
- Merge branch 'master' of https://github.com/dmattek/shiny-timecourse-selector · 64478248
  dmattek authored Aug 03, 2018
  
  64478248
- Bug fixes: sparse clustering removed temporarily because sparcl unavailable on CRAN · d379ec6b
  dmattek authored Aug 03, 2018
  
  d379ec6b
30 Jul, 2018 3 commits
- Update README.md · bb549dbf
  Maciej Dobrzynski authored Jul 30, 2018
  
  bb549dbf
- Update README.md · 9715e994
  Maciej Dobrzynski authored Jul 30, 2018
  
  9715e994
- Update README.md · 293d9b9c
  Maciej Dobrzynski authored Jul 30, 2018
  
  293d9b9c
14 Jun, 2018 1 commit
- Changing to ggplotTheme from tca package · 028696c2
  dmattek authored Jun 14, 2018
  
  028696c2
13 Jun, 2018 1 commit
- Change of default font and plot sizes. Use global ggplot theme. · 8c9a3de5
  dmattek authored Jun 13, 2018
  
  8c9a3de5
31 May, 2018 1 commit

Changed: · 949f801a

dmattek authored May 31, 2018

- in scatter plot, lm instea of rlm
- in dotplot, no border around dots
- in ribbon plot, lagend placement

949f801a

19 May, 2018 1 commit
- Change: bounds for display of y-axis changed from slider to numeric fields · b2e216db
  dmattek authored May 19, 2018
  
  b2e216db
08 May, 2018 2 commits
- Addded: an option to manually set bounds for heatmap colour scale · 1bfeb168
  dmattek authored May 08, 2018
  
  1bfeb168
- Fixed: NA treatment. Now NA's are allowed in clustering. NA removal and... · 31348d72
  dmattek authored May 08, 2018
```
Fixed: NA treatment. Now NA's are allowed in clustering. NA removal and interpolaton happen when the checkbox is checked in UI.
```
  31348d72
03 May, 2018 2 commits
- Fixed: y-axis trimming with NAs · ec391e2a
  dmattek authored May 03, 2018
  
  ec391e2a
- Added: setting bounds for y-axis in single-trajectory plot · 4cc5d937
  dmattek authored May 03, 2018
  
  4cc5d937
01 May, 2018 1 commit
- Fixed: list of required R packages to install · a8384aa9
  dmattek authored May 01, 2018
  
  a8384aa9
30 Apr, 2018 2 commits
- llow for missing diata when calculating quantiles for outliers · 923ecf4d
  dmattek authored Apr 30, 2018
  
  923ecf4d
- Rename "Korean Way" normalization to "Per Trajectory" · 89d77a74
  dmattek authored Apr 30, 2018
  
  89d77a74
26 Apr, 2018 1 commit
- Added: checkbox for NA interpolation. Time frequency input shows only when NA interpolation = T. · a168f75e
  dmattek authored Apr 26, 2018
  
  a168f75e
12 Apr, 2018 1 commit
- Fixed: file names for downloaded plots · 7b7d8294
  dmattek authored Apr 12, 2018
  
  7b7d8294
23 Mar, 2018 1 commit
- Bug fix: interpolation was expanding data to time series with freq 1; always.... · a50e814e
  dmattek authored Mar 23, 2018
```
Bug fix: interpolation was expanding data to time series with freq 1; always. Now user has to provide time frequency in UI.
```
  a50e814e
18 Mar, 2018 3 commits
- Bug fixes · 1b6e8beb
  dmattek authored Mar 18, 2018
  
  1b6e8beb
- Bug fixes · fb1bfe8b
  dmattek authored Mar 18, 2018
  
  fb1bfe8b
- Moved several functions to tca package · 5a175891
  dmattek authored Mar 18, 2018
  
  5a175891
27 Feb, 2018 1 commit
- Added: ribbon plot with averages · e102708a
  dmattek authored Feb 27, 2018
  
  e102708a