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Commit bc10b4d1 authored by Maciej Dobrzynski's avatar Maciej Dobrzynski
Browse files

Update of installation packages

parent e3b5f13f
......@@ -26,6 +26,7 @@ Following packages need to be installed in order to run the app locally:
* MASS
* robust
* pracma
* Hmisc
Install packages using `install.packages('name_of_the_package_from_the_list_above')` command in RStudio command line.
......@@ -36,27 +37,7 @@ install.packages(c("shiny", "shinyjs",
"dendextend", "dendextend", "RColorBrewer",
"sparcl", "dtw",
"imputeTS",
"MASS", "robust", "pracma"))
```
**Note**
As of July 2018, *sparcl* has been removed from CRAN. If you don't need sparse hierarchical clustering, you can simply comment the line `library(sparcl)` in `server.R` file or install it from the [archive](https://cran.r-project.org/web/packages/sparcl/index.html):
```
install_url('https://cran.r-project.org/src/contrib/Archive/sparcl/sparcl_1.0.3.tar.gz')
```
**Additionally**, a time series analysis package needs to be installed from [GitHub](https://github.com/dmattek/tca-package):
```
install_github("dmattek/tca-package")
```
The `install_url` and `install_github` functions are available in *devtools* package:
```
install.packages("devtools")
library(devtools)
"MASS", "robust", "pracma", "Hmisc"))
```
## Input file
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