Commit 64478248 authored by dmattek's avatar dmattek
parents d379ec6b bb549dbf
......@@ -2,7 +2,7 @@
## Running the app from the server
The app can be accessed here:
http://pertzlab.unibe.ch:3838/shiny-timecourse-inspector/
http://pertzlab.unibe.ch:3838/shiny-timecourse-inspector/ (UniBe VPN only!)
## Running the app locally
Alternatively, after downloading the code, the app can be run within RStudio. Open `server.R` or `ui.R` file, then click "Run App" button with green triangle in the upper right corner of the window with code open.
......@@ -39,6 +39,9 @@ install.packages(c("shiny", "shinyjs",
"MASS", "robust", "pracma"))
```
**Note**
As of July 2018, *sparcl* has been removed from CRAN. If you don't need sparse hierarchical clustering, you can simply comment the line `library(sparcl)` in `server.R` file or install it from the [archive](https://cran.r-project.org/web/packages/sparcl/index.html).
**Additionally**, a time series analysis package need to be installed from [GitHub](https://github.com/dmattek/tca-package):
```
......@@ -52,7 +55,6 @@ install.packages("devtools")
library(devtools)
```
## Input file
The app recognises CSV (comma-separated values) files: data columns separated by a comma, floating point numbers using a dot (full-stop).
......
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